Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.24■□□□□ 0.51
COL15A1P39059 AL133467.4-201ENST00000602953 725 ntBASIC18.24■□□□□ 0.51
COL15A1P39059 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.24■□□□□ 0.51
COL15A1P39059 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL15A1P39059 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL15A1P39059 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL15A1P39059 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 AL390755.1-201ENST00000623716 2027 ntBASIC18.23■□□□□ 0.51
COL15A1P39059 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.23■□□□□ 0.51
COL15A1P39059 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 GCSHP3-201ENST00000431120 391 ntBASIC18.23■□□□□ 0.51
COL15A1P39059 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.23■□□□□ 0.51
COL15A1P39059 AC024293.1-201ENST00000467930 498 ntBASIC18.23■□□□□ 0.51
COL15A1P39059 AC095040.1-201ENST00000513286 675 ntBASIC18.23■□□□□ 0.51
COL15A1P39059 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.23■□□□□ 0.51
COL15A1P39059 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 AL591122.2-201ENST00000624125 1853 ntBASIC18.23■□□□□ 0.51
COL15A1P39059 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.23■□□□□ 0.51
COL15A1P39059 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL15A1P39059 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL15A1P39059 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL15A1P39059 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.22■□□□□ 0.51
COL15A1P39059 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.22■□□□□ 0.51
COL15A1P39059 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 AC244250.3-201ENST00000620749 366 ntBASIC18.22■□□□□ 0.51
COL15A1P39059 AC011471.3-201ENST00000623576 402 ntBASIC18.22■□□□□ 0.51
COL15A1P39059 AL451007.2-201ENST00000632004 563 ntBASIC18.22■□□□□ 0.51
COL15A1P39059 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.22■□□□□ 0.51
COL15A1P39059 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.22■□□□□ 0.51
COL15A1P39059 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL15A1P39059 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL15A1P39059 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.22■□□□□ 0.51
COL15A1P39059 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL15A1P39059 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COL15A1P39059 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL15A1P39059 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms