Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD58P19256 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.74■□□□□ 0.11
CD58P19256 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD58P19256 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD58P19256 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD58P19256 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD58P19256 KRT8P28-201ENST00000433288 1390 ntBASIC15.74■□□□□ 0.11
CD58P19256 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CD58P19256 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CD58P19256 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.73■□□□□ 0.11
CD58P19256 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.73■□□□□ 0.11
CD58P19256 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.73■□□□□ 0.11
CD58P19256 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 DUX4L46-201ENST00000566845 751 ntBASIC15.73■□□□□ 0.11
CD58P19256 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.73■□□□□ 0.11
CD58P19256 AC008825.2-201ENST00000603374 718 ntBASIC15.73■□□□□ 0.11
CD58P19256 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CD58P19256 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.73■□□□□ 0.11
CD58P19256 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD58P19256 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.73■□□□□ 0.11
CD58P19256 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD58P19256 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.72■□□□□ 0.11
CD58P19256 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 AC012617.1-204ENST00000586340 2305 ntBASIC15.72■□□□□ 0.11
CD58P19256 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.72■□□□□ 0.11
CD58P19256 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.72■□□□□ 0.11
CD58P19256 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.72■□□□□ 0.11
CD58P19256 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 GOLGA2P4-201ENST00000441462 777 ntBASIC15.72■□□□□ 0.11
CD58P19256 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.72■□□□□ 0.11
CD58P19256 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 MIR4783-201ENST00000580343 82 ntBASIC15.72■□□□□ 0.11
CD58P19256 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.72■□□□□ 0.11
CD58P19256 AC132192.2-201ENST00000596206 1147 ntBASIC15.72■□□□□ 0.11
CD58P19256 AL096828.3-201ENST00000615354 462 ntBASIC15.72■□□□□ 0.11
CD58P19256 MIR6752-201ENST00000618442 71 ntBASIC15.72■□□□□ 0.11
CD58P19256 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 REXO1L6P-201ENST00000603433 1515 ntBASIC15.72■□□□□ 0.11
CD58P19256 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CD58P19256 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CD58P19256 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.72■□□□□ 0.11
CD58P19256 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.72■□□□□ 0.11
CD58P19256 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.72■□□□□ 0.11
CD58P19256 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.72■□□□□ 0.11
CD58P19256 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD58P19256 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.71■□□□□ 0.11
CD58P19256 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.71■□□□□ 0.11
CD58P19256 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD58P19256 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms