Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.65□□□□□ -0.06
MMP2P08253 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.65□□□□□ -0.06
MMP2P08253 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
MMP2P08253 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MMP2P08253 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MMP2P08253 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
MMP2P08253 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
MMP2P08253 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MMP2P08253 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MMP2P08253 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MMP2P08253 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MMP2P08253 TUBB8P4-201ENST00000511806 1324 ntBASIC14.65□□□□□ -0.06
MMP2P08253 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MMP2P08253 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
MMP2P08253 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.07
MMP2P08253 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MMP2P08253 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
MMP2P08253 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.64□□□□□ -0.07
MMP2P08253 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MMP2P08253 SERPINA13P-202ENST00000478994 924 ntBASIC14.64□□□□□ -0.07
MMP2P08253 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.64□□□□□ -0.07
MMP2P08253 PGAM1P5-201ENST00000548011 764 ntBASIC14.64□□□□□ -0.07
MMP2P08253 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
MMP2P08253 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 AC063926.3-201ENST00000624734 5658 ntBASIC14.64□□□□□ -0.07
MMP2P08253 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.64□□□□□ -0.07
MMP2P08253 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MMP2P08253 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 AC018629.1-201ENST00000623381 1736 ntBASIC14.63□□□□□ -0.07
MMP2P08253 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
MMP2P08253 AC090643.2-201ENST00000623442 2029 ntBASIC14.63□□□□□ -0.07
MMP2P08253 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MMP2P08253 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
MMP2P08253 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MMP2P08253 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.63□□□□□ -0.07
MMP2P08253 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.63□□□□□ -0.07
MMP2P08253 XBP1P1-201ENST00000436573 652 ntBASIC14.63□□□□□ -0.07
MMP2P08253 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 AC022217.1-201ENST00000521069 738 ntBASIC14.63□□□□□ -0.07
MMP2P08253 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 AC126915.1-201ENST00000522847 1038 ntBASIC14.63□□□□□ -0.07
MMP2P08253 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.63□□□□□ -0.07
MMP2P08253 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.63□□□□□ -0.07
MMP2P08253 SNORD3B-2-202ENST00000571722 791 ntBASIC14.63□□□□□ -0.07
MMP2P08253 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms