Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSBP07858 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSBP07858 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.77□□□□□ -0.21
CTSBP07858 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSBP07858 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSBP07858 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSBP07858 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.77□□□□□ -0.21
CTSBP07858 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSBP07858 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CTSBP07858 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 AHCYP4-201ENST00000419201 1315 ntBASIC13.76□□□□□ -0.21
CTSBP07858 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSBP07858 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 TSPY25P-201ENST00000429463 745 ntBASIC13.76□□□□□ -0.21
CTSBP07858 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSBP07858 RN7SL769P-201ENST00000469386 295 ntBASIC13.76□□□□□ -0.21
CTSBP07858 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSBP07858 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 AC242376.1-201ENST00000559033 726 ntBASIC13.76□□□□□ -0.21
CTSBP07858 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSBP07858 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 AC012044.1-201ENST00000603431 297 ntBASIC13.76□□□□□ -0.21
CTSBP07858 AC084346.2-201ENST00000607097 949 ntBASIC13.76□□□□□ -0.21
CTSBP07858 AL353770.1-201ENST00000614915 403 ntBASIC13.76□□□□□ -0.21
CTSBP07858 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSBP07858 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSBP07858 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSBP07858 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSBP07858 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTSBP07858 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSBP07858 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSBP07858 KRT8P19-201ENST00000551916 1455 ntBASIC13.75□□□□□ -0.21
CTSBP07858 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTSBP07858 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CTSBP07858 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 AL136379.1-201ENST00000623471 2642 ntBASIC13.75□□□□□ -0.21
CTSBP07858 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSBP07858 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CTSBP07858 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms