Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.39□□□□□ -0.27
KRT33AO76009 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.39□□□□□ -0.27
KRT33AO76009 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.39□□□□□ -0.27
KRT33AO76009 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.39□□□□□ -0.27
KRT33AO76009 GPR53P-205ENST00000457298 1084 ntBASIC13.39□□□□□ -0.27
KRT33AO76009 AC106760.1-201ENST00000508690 800 ntBASIC13.39□□□□□ -0.27
KRT33AO76009 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.39□□□□□ -0.27
KRT33AO76009 RAB43P1-201ENST00000561790 589 ntBASIC13.39□□□□□ -0.27
KRT33AO76009 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.39□□□□□ -0.27
KRT33AO76009 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.39□□□□□ -0.27
KRT33AO76009 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.39□□□□□ -0.27
KRT33AO76009 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.39□□□□□ -0.27
KRT33AO76009 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
KRT33AO76009 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.39□□□□□ -0.27
KRT33AO76009 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KRT33AO76009 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.38□□□□□ -0.27
KRT33AO76009 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 BOLA2P3-201ENST00000404566 256 ntBASIC13.38□□□□□ -0.27
KRT33AO76009 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.38□□□□□ -0.27
KRT33AO76009 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.38□□□□□ -0.27
KRT33AO76009 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
KRT33AO76009 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 USP32P1-208ENST00000506594 1164 ntBASIC13.38□□□□□ -0.27
KRT33AO76009 KRT17P8-201ENST00000540749 863 ntBASIC13.38□□□□□ -0.27
KRT33AO76009 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.38□□□□□ -0.27
KRT33AO76009 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.38□□□□□ -0.27
KRT33AO76009 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KRT33AO76009 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KRT33AO76009 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRT33AO76009 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
KRT33AO76009 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.37□□□□□ -0.27
KRT33AO76009 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
KRT33AO76009 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms