Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 AC072061.1-201ENST00000569710 2234 ntBASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.25□□□□□ -0.77
UBE2D4Q9Y2X8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TSEN15P1-201ENST00000423257 515 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC097493.3-201ENST00000509725 367 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SORD2P-201ENST00000558556 1069 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC025678.2-201ENST00000562061 970 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SPDYE22P-201ENST00000582158 798 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC138761.1-201ENST00000584393 385 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC015911.4-201ENST00000588022 1070 ntBASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBE2D4Q9Y2X8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 LRRC59-203ENST00000576448 1531 ntBASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBE2D4Q9Y2X8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms