Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 AC008267.1-201ENST00000474858 1069 ntBASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 CHCHD2P2-201ENST00000503744 321 ntBASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 MRPL22P1-201ENST00000505398 616 ntBASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 AC087392.5-201ENST00000612517 489 ntBASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNPO2Q9UMS6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 USP17L6P-201ENST00000382470 1197 ntBASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 AC087045.2-201ENST00000606279 1003 ntBASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 AC011491.1-203ENST00000637688 543 ntBASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPO2Q9UMS6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 HLA-DMA-203ENST00000395305 777 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 IQSEC3P1-201ENST00000538799 536 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 AC138701.2-201ENST00000553634 226 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SIGLEC22P-201ENST00000599104 714 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 AC007881.3-201ENST00000608897 607 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 TEKT4P2-202ENST00000559466 1312 ntBASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SYNPO2Q9UMS6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SYNPO2Q9UMS6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms