Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C12orf4Q9NQ89 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 LILRP1-201ENST00000444199 1370 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 RPL37AP1-201ENST00000412502 279 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 HLA-V-204ENST00000476601 1289 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AL512356.2-201ENST00000546955 174 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 LINC01115-203ENST00000606068 577 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AF228730.6-201ENST00000641497 218 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC084121.3-201ENST00000641716 218 ntBASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C12orf4Q9NQ89 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C12orf4Q9NQ89 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms