Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 AL512343.1-201ENST00000605837 169 ntBASIC14.42□□□□□ -0.1
NPAS2Q99743 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPAS2Q99743 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NPAS2Q99743 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.42□□□□□ -0.1
NPAS2Q99743 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NPAS2Q99743 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.41□□□□□ -0.1
NPAS2Q99743 HLA-K-203ENST00000430151 1046 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 AC007274.1-201ENST00000439805 662 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 CROCCP4-201ENST00000457096 498 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 TMEM198B-204ENST00000484016 896 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.41□□□□□ -0.1
NPAS2Q99743 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.41□□□□□ -0.1
NPAS2Q99743 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.41□□□□□ -0.1
NPAS2Q99743 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 SNX29P1-201ENST00000548357 1007 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 RAB43P1-201ENST00000561790 589 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 CLUHP6-201ENST00000580789 941 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 AL359881.2-201ENST00000602973 570 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NPAS2Q99743 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPAS2Q99743 KRT8P14-201ENST00000414254 1442 ntBASIC14.41□□□□□ -0.1
NPAS2Q99743 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
NPAS2Q99743 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.4□□□□□ -0.1
NPAS2Q99743 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPAS2Q99743 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
NPAS2Q99743 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NPAS2Q99743 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.4□□□□□ -0.1
NPAS2Q99743 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPAS2Q99743 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.4□□□□□ -0.1
NPAS2Q99743 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
NPAS2Q99743 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPAS2Q99743 C1QBPP1-201ENST00000400117 770 ntBASIC14.4□□□□□ -0.1
NPAS2Q99743 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NPAS2Q99743 ACTG1P3-201ENST00000431775 1114 ntBASIC14.4□□□□□ -0.1
NPAS2Q99743 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.4□□□□□ -0.1
NPAS2Q99743 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.4□□□□□ -0.1
NPAS2Q99743 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.4□□□□□ -0.1
NPAS2Q99743 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms