Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CCL13Q99616 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.3□□□□□ -0.44
CCL13Q99616 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CCL13Q99616 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CCL13Q99616 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 MYADML-201ENST00000474610 2147 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 REXO1L6P-201ENST00000603433 1515 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL13Q99616 GOLGA2P4-201ENST00000441462 777 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL13Q99616 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL13Q99616 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CCL13Q99616 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 AC100827.2-201ENST00000563214 1194 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 AC091271.1-201ENST00000611877 1162 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL13Q99616 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 TUBB1P2-201ENST00000422712 1306 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 TUBB1P1-201ENST00000503144 1300 ntBASIC12.29□□□□□ -0.44
CCL13Q99616 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL13Q99616 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL13Q99616 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL13Q99616 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL13Q99616 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.28□□□□□ -0.44
CCL13Q99616 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL13Q99616 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms