Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AC074338.1-201ENST00000416825 156 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 KRT18P56-201ENST00000507275 550 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AC079140.1-201ENST00000508039 487 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SLC25A39P2-201ENST00000537614 270 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 BANF1P1-201ENST00000553684 263 ntBASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.89□□□□□ -0.35
LYSMD2Q8IV50 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC018445.4-201ENST00000624066 2291 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AL359845.1-201ENST00000458202 1648 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AL133267.1-201ENST00000398220 340 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SPDYE11-202ENST00000450699 704 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 IGHV3-62-201ENST00000520057 340 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC105021.1-202ENST00000570572 669 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SPDYE9P-201ENST00000570642 692 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC026120.1-201ENST00000611536 926 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SPDYE10P-202ENST00000612005 668 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SPDYE8P-202ENST00000612377 668 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AL157414.3-201ENST00000624276 1954 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AC022497.1-201ENST00000624916 3691 ntBASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.88□□□□□ -0.35
LYSMD2Q8IV50 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LYSMD2Q8IV50 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms