Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TMEM14DP-201ENST00000422205 345 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 FAM197Y7-201ENST00000432892 766 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 FAM8A4P-201ENST00000435433 1213 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 PUDPP3-201ENST00000445368 636 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 FTH1P14-201ENST00000482930 551 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 USP32P1-208ENST00000506594 1164 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 RNA5SP486-201ENST00000515961 83 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 AC132938.2-201ENST00000579188 680 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 AL591163.1-201ENST00000641757 987 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 MST1P2-201ENST00000457982 2291 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AL512384.1-201ENST00000406683 331 ntBASIC15.27■□□□□ 0.04
RFX6Q8HWS3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC233724.13-201ENST00000598383 410 ntBASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AL022328.1-201ENST00000610050 478 ntBASIC15.27■□□□□ 0.04
RFX6Q8HWS3 AC244669.2-201ENST00000612320 853 ntBASIC15.27■□□□□ 0.04
RFX6Q8HWS3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RFX6Q8HWS3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.27■□□□□ 0.03
RFX6Q8HWS3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFX6Q8HWS3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 CICP16-201ENST00000502609 2813 ntBASIC15.26■□□□□ 0.03
RFX6Q8HWS3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.26■□□□□ 0.03
RFX6Q8HWS3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms