Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.3■□□□□ 0.2
TRIM50Q86XT4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 RN7SL371P-201ENST00000578099 267 ntBASIC16.3■□□□□ 0.2
TRIM50Q86XT4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 LINC02228-204ENST00000642115 2962 ntBASIC16.3■□□□□ 0.2
TRIM50Q86XT4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRIM50Q86XT4 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 DBET-201ENST00000630918 3363 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC009093.10-201ENST00000641956 1442 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 CAP2P1-201ENST00000557743 1390 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 KHSRPP1-201ENST00000427983 1768 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 FRMPD2B-201ENST00000431305 1347 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 RPL8P2-201ENST00000430538 502 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC069218.1-201ENST00000435269 762 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC003686.1-201ENST00000550956 1034 ntBASIC16.29■□□□□ 0.2
TRIM50Q86XT4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM50Q86XT4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM50Q86XT4 MAGEA5-201ENST00000446757 942 ntBASIC16.28■□□□□ 0.2
TRIM50Q86XT4 FTLP1-201ENST00000449155 526 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms