Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SLC25A39P2-201ENST00000537614 270 ntBASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 AL355102.3-201ENST00000554299 1678 ntBASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 MARK2P9-201ENST00000430958 1727 ntBASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC15.56■□□□□ 0.08
ERCC6LQ2NKX8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 TUBB8P4-201ENST00000511806 1324 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 RPL13P2-201ENST00000440687 659 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AC140113.2-201ENST00000604370 208 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 FAM197Y3-203ENST00000618346 717 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AL513190.1-201ENST00000621254 727 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 PCDHA5-203ENST00000614258 4248 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 AL928654.5-201ENST00000624831 2501 ntBASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ERCC6LQ2NKX8 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC015688.4-201ENST00000580780 1647 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC027369.3-201ENST00000530465 3707 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC060814.4-201ENST00000594169 2163 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms