Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H3AP68431 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 AC079316.1-201ENST00000548397 411 ntBASIC12.81□□□□□ -0.36
HIST1H3AP68431 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 SHC1P1-201ENST00000425230 1745 ntBASIC12.81□□□□□ -0.36
HIST1H3AP68431 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 HSPA8P5-201ENST00000456928 2069 ntBASIC12.81□□□□□ -0.36
HIST1H3AP68431 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H3AP68431 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H3AP68431 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 LINC01230-201ENST00000625222 3017 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AC067750.1-201ENST00000608826 6545 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AC005586.2-201ENST00000563946 837 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms