Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.07□□□□□ -0.32
GFRA1P56159 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.07□□□□□ -0.32
GFRA1P56159 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GFRA1P56159 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
GFRA1P56159 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
GFRA1P56159 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GFRA1P56159 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
GFRA1P56159 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GFRA1P56159 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
GFRA1P56159 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GFRA1P56159 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 AP001267.2-201ENST00000532619 2086 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.06□□□□□ -0.32
GFRA1P56159 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 CHMP4BP1-201ENST00000556017 588 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.06□□□□□ -0.32
GFRA1P56159 AL021578.1-201ENST00000613646 709 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 AC091812.3-201ENST00000621362 345 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 CU633904.3-201ENST00000624042 1029 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
GFRA1P56159 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.06□□□□□ -0.32
GFRA1P56159 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
GFRA1P56159 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GFRA1P56159 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 AC106881.1-201ENST00000605849 3329 ntBASIC13.05□□□□□ -0.32
GFRA1P56159 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.05□□□□□ -0.32
GFRA1P56159 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms