Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A4P31645 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A4P31645 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 AHCYP4-201ENST00000419201 1315 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC6A4P31645 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A4P31645 AC015656.1-201ENST00000624209 3578 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SLC6A4P31645 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 AL161932.2-201ENST00000435436 679 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 Z97180.1-201ENST00000445173 988 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A4P31645 AC012618.1-201ENST00000461223 412 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A4P31645 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A4P31645 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A4P31645 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SLC6A4P31645 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A4P31645 AF254983.2-201ENST00000612331 135 ntBASIC14.96□□□□□ -0.01
SLC6A4P31645 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A4P31645 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A4P31645 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A4P31645 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SLC6A4P31645 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A4P31645 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC6A4P31645 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC6A4P31645 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A4P31645 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC6A4P31645 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 AL662890.1-201ENST00000396818 632 ntBASIC14.95□□□□□ -0.02
SLC6A4P31645 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC6A4P31645 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC6A4P31645 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 AC090857.1-201ENST00000527400 390 ntBASIC14.95□□□□□ -0.02
SLC6A4P31645 AC005586.2-201ENST00000563946 837 ntBASIC14.95□□□□□ -0.02
SLC6A4P31645 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 MIR6074-201ENST00000612054 107 ntBASIC14.95□□□□□ -0.02
SLC6A4P31645 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 LINC01165-201ENST00000445190 1623 ntBASIC14.95□□□□□ -0.02
SLC6A4P31645 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A4P31645 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A4P31645 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A4P31645 MIR600HG-201ENST00000449175 5984 ntBASIC14.94□□□□□ -0.02
SLC6A4P31645 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A4P31645 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A4P31645 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms