Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.5□□□□□ -0.25
SHC1P29353 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SHC1P29353 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 KRT223P-202ENST00000449164 1292 ntBASIC13.5□□□□□ -0.25
SHC1P29353 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.5□□□□□ -0.25
SHC1P29353 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.5□□□□□ -0.25
SHC1P29353 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.5□□□□□ -0.25
SHC1P29353 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 MIR6805-201ENST00000615055 62 ntBASIC13.5□□□□□ -0.25
SHC1P29353 COX11-210ENST00000639671 696 ntBASIC13.5□□□□□ -0.25
SHC1P29353 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.5□□□□□ -0.25
SHC1P29353 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.5□□□□□ -0.25
SHC1P29353 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHC1P29353 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 AC011474.4-201ENST00000623523 2076 ntBASIC13.49□□□□□ -0.25
SHC1P29353 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 AL138725.1-201ENST00000407347 1314 ntBASIC13.49□□□□□ -0.25
SHC1P29353 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 HLA-V-201ENST00000429037 534 ntBASIC13.49□□□□□ -0.25
SHC1P29353 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 FAM8A4P-201ENST00000435433 1213 ntBASIC13.49□□□□□ -0.25
SHC1P29353 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 BNIP3P42-201ENST00000454982 569 ntBASIC13.49□□□□□ -0.25
SHC1P29353 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.49□□□□□ -0.25
SHC1P29353 FTLP10-202ENST00000505798 471 ntBASIC13.49□□□□□ -0.25
SHC1P29353 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.49□□□□□ -0.25
SHC1P29353 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.49□□□□□ -0.25
SHC1P29353 BNIP3P29-201ENST00000598302 571 ntBASIC13.49□□□□□ -0.25
SHC1P29353 AC138696.2-201ENST00000607376 223 ntBASIC13.49□□□□□ -0.25
SHC1P29353 AC133552.6-201ENST00000613406 534 ntBASIC13.49□□□□□ -0.25
SHC1P29353 AC011447.5-201ENST00000616168 564 ntBASIC13.49□□□□□ -0.25
SHC1P29353 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.49□□□□□ -0.25
SHC1P29353 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHC1P29353 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SHC1P29353 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms