Protein–RNA interactions for Protein: P26358

DNMT1, DNA (cytosine-5)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 1,616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1P26358 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
DNMT1P26358 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DNMT1P26358 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 MSANTD2P1-201ENST00000445341 1368 ntBASIC21.28■■□□□ 1
DNMT1P26358 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DNMT1P26358 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.28■■□□□ 1
DNMT1P26358 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC21.28■■□□□ 1
DNMT1P26358 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DNMT1P26358 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.28■■□□□ 1
DNMT1P26358 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DNMT1P26358 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.28■■□□□ 1
DNMT1P26358 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC21.28■■□□□ 1
DNMT1P26358 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
DNMT1P26358 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.27■■□□□ 1
DNMT1P26358 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC21.27■■□□□ 1
DNMT1P26358 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.27■■□□□ 1
DNMT1P26358 STK24P1-201ENST00000455035 1291 ntBASIC21.27■■□□□ 1
DNMT1P26358 RNA5SP406-201ENST00000516106 112 ntBASIC21.27■■□□□ 1
DNMT1P26358 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.27■■□□□ 1
DNMT1P26358 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC21.27■■□□□ 1
DNMT1P26358 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DNMT1P26358 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 RPL13AP3-202ENST00000494676 1473 ntBASIC21.27■■□□□ 1
DNMT1P26358 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC21.27■■□□□ 1
DNMT1P26358 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
DNMT1P26358 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DNMT1P26358 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.27■■□□□ 1
DNMT1P26358 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 RN7SL23P-201ENST00000484055 275 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 TRMT112P3-201ENST00000580149 358 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 AC055811.3-201ENST00000584952 686 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 AC097359.2-201ENST00000604992 2389 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DNMT1P26358 AL357373.1-201ENST00000394974 322 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 AC073210.1-201ENST00000414799 232 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 HMGA1P1-201ENST00000415560 1062 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.26■□□□□ 0.99
DNMT1P26358 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC21.26■□□□□ 0.99
DNMT1P26358 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 MT2A-202ENST00000561491 581 ntTSL 2 BASIC21.26■□□□□ 0.99
DNMT1P26358 MIR4265-201ENST00000582152 99 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 AC010976.2-201ENST00000609697 852 ntBASIC21.26■□□□□ 0.99
DNMT1P26358 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
DNMT1P26358 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 BX640514.1-201ENST00000583223 1918 ntBASIC21.25■□□□□ 0.99
DNMT1P26358 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.25■□□□□ 0.99
DNMT1P26358 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
DNMT1P26358 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
DNMT1P26358 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
DNMT1P26358 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC21.25■□□□□ 0.99
DNMT1P26358 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC21.25■□□□□ 0.99
DNMT1P26358 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
DNMT1P26358 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DNMT1P26358 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms