Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBL4AP11441 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBL4AP11441 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBL4AP11441 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
UBL4AP11441 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
UBL4AP11441 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBL4AP11441 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBL4AP11441 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.65□□□□□ -0.22
UBL4AP11441 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.65□□□□□ -0.22
UBL4AP11441 AOC4P-203ENST00000566825 2289 ntBASIC13.65□□□□□ -0.22
UBL4AP11441 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBL4AP11441 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBL4AP11441 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 MRPL37P1-201ENST00000592451 1337 ntBASIC13.64□□□□□ -0.23
UBL4AP11441 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
UBL4AP11441 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.64□□□□□ -0.23
UBL4AP11441 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UBL4AP11441 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UBL4AP11441 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBL4AP11441 AP001267.2-201ENST00000532619 2086 ntBASIC13.64□□□□□ -0.23
UBL4AP11441 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.64□□□□□ -0.23
UBL4AP11441 AC020910.5-201ENST00000623668 1865 ntBASIC13.64□□□□□ -0.23
UBL4AP11441 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.64□□□□□ -0.23
UBL4AP11441 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBL4AP11441 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
UBL4AP11441 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
UBL4AP11441 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.64□□□□□ -0.23
UBL4AP11441 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBL4AP11441 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms