Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.13□□□□□ -0.31
ZIC3O60481 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 AL133338.1-201ENST00000565695 1517 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 AC064801.2-201ENST00000625052 1303 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ZIC3O60481 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.12□□□□□ -0.31
ZIC3O60481 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 OR2R1P-201ENST00000441404 914 ntBASIC13.12□□□□□ -0.31
ZIC3O60481 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC3O60481 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC3O60481 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ZIC3O60481 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC3O60481 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.12□□□□□ -0.31
ZIC3O60481 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
ZIC3O60481 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 AC104506.1-201ENST00000609247 429 ntBASIC13.12□□□□□ -0.31
ZIC3O60481 AL157813.1-201ENST00000612996 587 ntBASIC13.12□□□□□ -0.31
ZIC3O60481 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC3O60481 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZIC3O60481 AL157791.1-201ENST00000553667 1699 ntBASIC13.12□□□□□ -0.31
ZIC3O60481 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ZIC3O60481 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ZIC3O60481 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.11□□□□□ -0.31
ZIC3O60481 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC3O60481 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC3O60481 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC3O60481 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
ZIC3O60481 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms