Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EXTL3O43909 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
EXTL3O43909 AC005089.1-201ENST00000619486 2241 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 AC012617.1-204ENST00000586340 2305 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
EXTL3O43909 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.84■□□□□ 0.13
EXTL3O43909 AC006033.1-201ENST00000440505 426 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 ST13P19-201ENST00000442505 1124 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 AC104073.2-201ENST00000453737 312 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 KRT8P13-201ENST00000463294 1010 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.84■□□□□ 0.13
EXTL3O43909 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.84■□□□□ 0.13
EXTL3O43909 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.84■□□□□ 0.13
EXTL3O43909 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 AC104506.1-201ENST00000609247 429 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.84■□□□□ 0.13
EXTL3O43909 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
EXTL3O43909 AL009178.2-201ENST00000597278 2719 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 FAM90A7P-201ENST00000382628 1395 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 FAM90A23P-201ENST00000400136 1395 ntBASIC15.84■□□□□ 0.13
EXTL3O43909 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EXTL3O43909 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EXTL3O43909 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EXTL3O43909 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
EXTL3O43909 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.83■□□□□ 0.12
EXTL3O43909 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.83■□□□□ 0.12
EXTL3O43909 AC106794.1-201ENST00000506935 792 ntBASIC15.83■□□□□ 0.12
EXTL3O43909 AC003686.1-201ENST00000550956 1034 ntBASIC15.83■□□□□ 0.12
EXTL3O43909 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.83■□□□□ 0.12
EXTL3O43909 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.83■□□□□ 0.12
EXTL3O43909 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
EXTL3O43909 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
EXTL3O43909 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EXTL3O43909 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.83■□□□□ 0.12
EXTL3O43909 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.83■□□□□ 0.12
EXTL3O43909 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms