Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.79□□□□□ -0.04
KDELR3O43731 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KDELR3O43731 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
KDELR3O43731 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KDELR3O43731 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
KDELR3O43731 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KDELR3O43731 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.78□□□□□ -0.04
KDELR3O43731 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.78□□□□□ -0.04
KDELR3O43731 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KDELR3O43731 RN7SKP214-201ENST00000364208 315 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 AL008707.1-201ENST00000422498 534 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.78□□□□□ -0.04
KDELR3O43731 OR2R1P-201ENST00000441404 914 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.78□□□□□ -0.04
KDELR3O43731 RCC2P8-201ENST00000502779 1035 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.78□□□□□ -0.04
KDELR3O43731 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 AC103810.3-201ENST00000583567 96 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 AL805961.1-203ENST00000641078 1258 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KDELR3O43731 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 OR2I1P-209ENST00000641730 5365 ntBASIC14.78□□□□□ -0.04
KDELR3O43731 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.78□□□□□ -0.04
KDELR3O43731 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KDELR3O43731 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
KDELR3O43731 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 LAP3P2-201ENST00000454686 1454 ntBASIC14.77□□□□□ -0.04
KDELR3O43731 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
KDELR3O43731 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.77□□□□□ -0.04
KDELR3O43731 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
KDELR3O43731 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
KDELR3O43731 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KDELR3O43731 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
KDELR3O43731 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KDELR3O43731 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KDELR3O43731 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.77□□□□□ -0.05
KDELR3O43731 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.77□□□□□ -0.05
KDELR3O43731 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
KDELR3O43731 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.77□□□□□ -0.05
KDELR3O43731 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
KDELR3O43731 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
KDELR3O43731 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
KDELR3O43731 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.77□□□□□ -0.05
KDELR3O43731 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KDELR3O43731 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.77□□□□□ -0.05
KDELR3O43731 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KDELR3O43731 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.77□□□□□ -0.05
KDELR3O43731 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
KDELR3O43731 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.77□□□□□ -0.05
KDELR3O43731 AL591471.1-201ENST00000621855 229 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms