Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 AL008638.5-201ENST00000623814 1298 ntBASIC19.2■□□□□ 0.66
APAF1O14727 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
APAF1O14727 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APAF1O14727 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
APAF1O14727 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APAF1O14727 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC19.19■□□□□ 0.66
APAF1O14727 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC19.19■□□□□ 0.66
APAF1O14727 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
APAF1O14727 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
APAF1O14727 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.19■□□□□ 0.66
APAF1O14727 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.19■□□□□ 0.66
APAF1O14727 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.19■□□□□ 0.66
APAF1O14727 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.19■□□□□ 0.66
APAF1O14727 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.19■□□□□ 0.66
APAF1O14727 AC008805.1-201ENST00000590892 364 ntBASIC19.19■□□□□ 0.66
APAF1O14727 AL118558.3-201ENST00000607414 1079 ntBASIC19.19■□□□□ 0.66
APAF1O14727 AL023803.2-201ENST00000620080 638 ntBASIC19.19■□□□□ 0.66
APAF1O14727 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.19■□□□□ 0.66
APAF1O14727 MST1P2-201ENST00000457982 2291 ntBASIC19.19■□□□□ 0.66
APAF1O14727 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
APAF1O14727 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
APAF1O14727 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
APAF1O14727 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APAF1O14727 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
APAF1O14727 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.18■□□□□ 0.66
APAF1O14727 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
APAF1O14727 DPM3-202ENST00000368399 517 ntBASIC19.18■□□□□ 0.66
APAF1O14727 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.18■□□□□ 0.66
APAF1O14727 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.18■□□□□ 0.66
APAF1O14727 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.18■□□□□ 0.66
APAF1O14727 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.18■□□□□ 0.66
APAF1O14727 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
APAF1O14727 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
APAF1O14727 AC068587.8-201ENST00000641239 219 ntBASIC19.18■□□□□ 0.66
APAF1O14727 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 AL022313.4-201ENST00000562756 2046 ntBASIC19.18■□□□□ 0.66
APAF1O14727 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
APAF1O14727 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC19.18■□□□□ 0.66
APAF1O14727 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.18■□□□□ 0.66
APAF1O14727 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms