Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 KRT17P5-201ENST00000332088 839 ntBASIC14.25□□□□□ -0.13
C4orf47A7E2U8 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 RN7SKP109-201ENST00000410592 316 ntBASIC14.25□□□□□ -0.13
C4orf47A7E2U8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 GUSBP10-201ENST00000417412 665 ntBASIC14.25□□□□□ -0.13
C4orf47A7E2U8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 AC055811.3-201ENST00000584952 686 ntBASIC14.25□□□□□ -0.13
C4orf47A7E2U8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 AC112693.3-201ENST00000624819 1983 ntBASIC14.25□□□□□ -0.13
C4orf47A7E2U8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C4orf47A7E2U8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC006486.2-201ENST00000624246 2199 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 COX20P1-201ENST00000366529 357 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ACTBP7-201ENST00000418351 1124 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PEBP1P2-201ENST00000603980 558 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms