Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AC015910.1-201ENST00000579400 975 ntBASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AC009542.2-202ENST00000619004 1067 ntBASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AC007787.1-201ENST00000588095 1583 ntBASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX49Q9Y6V7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 DGCR9-201ENST00000609630 2415 ntBASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ACTBP11-201ENST00000436287 1126 ntBASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX49Q9Y6V7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX49Q9Y6V7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms