Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 AQP7P3-201ENST00000624547 1041 ntBASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCFC2Q9Y5Z7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 LINC00528-201ENST00000600723 2160 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PGAM1P12-201ENST00000505622 748 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AC226150.1-201ENST00000544259 466 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AL133467.4-201ENST00000602953 725 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 LAP3P2-201ENST00000454686 1454 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AL591122.2-201ENST00000624125 1853 ntBASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.11■□□□□ 0.01
HCFC2Q9Y5Z7 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 AC025183.3-201ENST00000623526 1482 ntBASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.1■□□□□ 0.01
HCFC2Q9Y5Z7 SCARNA12-201ENST00000459155 270 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms