Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF11Q9Y3C5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RN7SL832P-201ENST00000607781 1756 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AC215219.1-201ENST00000400706 1817 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RN7SL837P-201ENST00000463010 287 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AP001889.1-201ENST00000525414 633 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 RN7SL48P-201ENST00000579283 293 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AC090505.1-201ENST00000430515 1834 ntBASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF11Q9Y3C5 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF11Q9Y3C5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 RN7SL752P-201ENST00000463779 287 ntBASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 FTLP10-202ENST00000505798 471 ntBASIC14.33□□□□□ -0.12
RNF11Q9Y3C5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms