Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC013726.1-201ENST00000563747 2285 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 HSPB1P2-201ENST00000448722 546 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 EIF4HP1-201ENST00000453115 687 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC004466.1-201ENST00000599515 1080 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC015967.2-201ENST00000624092 234 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AC006435.4-201ENST00000625037 234 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AL356737.1-201ENST00000634391 234 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 AL023775.1-201ENST00000454907 1746 ntBASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FNDC3AQ9Y2H6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
FNDC3AQ9Y2H6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 POM121L10P-201ENST00000436994 1285 ntBASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 UPF3AP2-201ENST00000457924 1132 ntBASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms