Protein–RNA interactions for Protein: Q9NT99

LRRC4B, Leucine-rich repeat-containing protein 4B, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4BQ9NT99 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 AC117503.4-201ENST00000623229 1418 ntBASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC4BQ9NT99 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 EEF1DP5-201ENST00000431410 772 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 RHOQP2-201ENST00000449922 579 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 RN7SL455P-201ENST00000580629 282 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 TYMSP2-201ENST00000589501 424 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC4BQ9NT99 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AC073210.1-201ENST00000414799 232 ntBASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AC136604.1-202ENST00000425471 771 ntBASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SRP14-208ENST00000560773 468 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 AC005586.2-201ENST00000563946 837 ntBASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 NEK4P3-201ENST00000604859 544 ntBASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC4BQ9NT99 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRC4BQ9NT99 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms