Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC011840.2-201ENST00000563063 1520 ntBASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ZFYVE26-201ENST00000347230 9675 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ANKUB1-202ENST00000462519 2222 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MOV10L1-210ENST00000545383 3889 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 BOLA2-SMG1P6-201ENST00000565417 3103 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MIR4313-201ENST00000580760 101 ntBASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SLIT2-212ENST00000622093 6380 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MPST-208ENST00000628507 698 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 FAM90A17P-201ENST00000533716 1957 ntBASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 LRTOMT-207ENST00000435085 3194 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AC010478.1-201ENST00000601500 6762 ntBASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ATG5-208ENST00000635758 3035 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 GOLGA2P1-201ENST00000512938 2906 ntBASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CDC42SE1Q9NRR8 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AL353616.1-201ENST00000436315 2860 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms