Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 HMGA1P1-201ENST00000415560 1062 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 AP001184.1-201ENST00000637936 376 ntBASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP2Q96SN8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 SHMT1P1-201ENST00000419974 1312 ntBASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 AC012362.1-201ENST00000434906 739 ntBASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CHCHD2P2-201ENST00000503744 321 ntBASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 AP000322.3-201ENST00000608665 388 ntBASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDK5RAP2Q96SN8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 KRT8P18-201ENST00000413425 1445 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC068867.1-201ENST00000559855 150 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 FAM45BP-202ENST00000592932 1624 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 PDXDC2P-206ENST00000534700 1315 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 LINC00634-202ENST00000505157 222 ntBASIC16.8■□□□□ 0.28
CDK5RAP2Q96SN8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms