Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 AC005746.3-201ENST00000614751 393 ntBASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC23.12■■□□□ 1.29
CHMP7Q8WUX9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 SHMT1P1-201ENST00000419974 1312 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 RPSAP12-201ENST00000435879 888 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 ZNF877P-201ENST00000437614 612 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 AC133141.1-201ENST00000443015 339 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 KRT19P4-201ENST00000443208 943 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 HNRNPA3P6-201ENST00000472163 1006 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 AC113385.2-201ENST00000614465 762 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 PSME2-217ENST00000615264 874 ntTSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 PSME2-218ENST00000630027 185 ntTSL 3 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 KRT8P43-201ENST00000406052 1458 ntBASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC23.11■■□□□ 1.29
CHMP7Q8WUX9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 HDGF-202ENST00000368206 960 ntTSL 5 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 MIR611-201ENST00000384869 67 ntBASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AC092910.2-201ENST00000491262 348 ntBASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AC006986.1-201ENST00000612764 241 ntBASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 TBC1D27-202ENST00000424239 1573 ntBASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHMP7Q8WUX9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 AL050341.2-201ENST00000567508 1541 ntBASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHMP7Q8WUX9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms