Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 AC104982.3-201ENST00000581995 514 ntBASIC15.53■□□□□ 0.08
UBA3Q8TBC4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.53■□□□□ 0.08
UBA3Q8TBC4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBA3Q8TBC4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 RN7SL832P-201ENST00000607781 1756 ntBASIC15.52■□□□□ 0.08
UBA3Q8TBC4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 RNMTL1P1-201ENST00000454103 560 ntBASIC15.52■□□□□ 0.08
UBA3Q8TBC4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 MIR6720-201ENST00000611664 98 ntBASIC15.52■□□□□ 0.08
UBA3Q8TBC4 AC005695.3-201ENST00000614522 232 ntBASIC15.52■□□□□ 0.08
UBA3Q8TBC4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBA3Q8TBC4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 TMBIM7P-202ENST00000641474 1516 ntBASIC15.52■□□□□ 0.07
UBA3Q8TBC4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBA3Q8TBC4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 MIR663B-201ENST00000408361 115 ntBASIC15.51■□□□□ 0.07
UBA3Q8TBC4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 RN7SL219P-201ENST00000582872 296 ntBASIC15.51■□□□□ 0.07
UBA3Q8TBC4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA3Q8TBC4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms