Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 AL353779.1-201ENST00000434793 351 ntBASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 AL512356.2-201ENST00000546955 174 ntBASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 AC092364.2-202ENST00000597012 1073 ntBASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD2Q8NHY2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 DMBT1P1-203ENST00000636837 4628 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 FAM86GP-201ENST00000448322 971 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 AC010336.2-201ENST00000564226 506 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 GPALPP1-207ENST00000611650 899 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 AC006538.3-201ENST00000612495 578 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 AC004461.2-201ENST00000629517 803 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 AL118506.1-201ENST00000601296 3082 ntBASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RFWD2Q8NHY2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms