Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC073413.1-201ENST00000603927 732 ntBASIC13.76□□□□□ -0.21
NUP43Q8NFH3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AL928921.2-201ENST00000641325 2442 ntBASIC13.76□□□□□ -0.21
NUP43Q8NFH3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.76□□□□□ -0.21
NUP43Q8NFH3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.76□□□□□ -0.21
NUP43Q8NFH3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NUP43Q8NFH3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 AL136309.1-201ENST00000403917 691 ntBASIC13.75□□□□□ -0.21
NUP43Q8NFH3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 SORD2P-201ENST00000558556 1069 ntBASIC13.75□□□□□ -0.21
NUP43Q8NFH3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 RHOXF1P1-202ENST00000635473 501 ntBASIC13.75□□□□□ -0.21
NUP43Q8NFH3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.75□□□□□ -0.21
NUP43Q8NFH3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC016397.2-201ENST00000624848 1985 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 KRT8P4-201ENST00000509735 1454 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AHCYP2-201ENST00000430630 1300 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CROCCP4-201ENST00000457096 498 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ZACNP1-201ENST00000612259 710 ntBASIC13.74□□□□□ -0.21
NUP43Q8NFH3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NUP43Q8NFH3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms