Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RNF44Q7L0R7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 TUBB8P8-201ENST00000458717 1058 ntBASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AL118558.3-201ENST00000607414 1079 ntBASIC14.08□□□□□ -0.16
RNF44Q7L0R7 MIR6720-201ENST00000611664 98 ntBASIC14.08□□□□□ -0.16
RNF44Q7L0R7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 KHSRPP1-201ENST00000427983 1768 ntBASIC14.08□□□□□ -0.16
RNF44Q7L0R7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RNF44Q7L0R7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 PEG13-201ENST00000631594 5667 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AL645933.1-201ENST00000440087 609 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AC004898.1-201ENST00000451057 766 ntBASIC14.07□□□□□ -0.16
RNF44Q7L0R7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNF44Q7L0R7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms