Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 SIGLEC18P-201ENST00000602271 909 ntBASIC17.04■□□□□ 0.32
CERKLQ49MI3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 AL805961.1-201ENST00000642026 753 ntBASIC17.04■□□□□ 0.32
CERKLQ49MI3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CERKLQ49MI3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CERKLQ49MI3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 MYADML-201ENST00000474610 2147 ntBASIC17.03■□□□□ 0.32
CERKLQ49MI3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 MIR557-201ENST00000385239 98 ntBASIC17.03■□□□□ 0.32
CERKLQ49MI3 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AC093752.3-201ENST00000567343 901 ntBASIC17.03■□□□□ 0.32
CERKLQ49MI3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AC021016.3-201ENST00000608367 477 ntBASIC17.03■□□□□ 0.32
CERKLQ49MI3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 KRT8P31-201ENST00000504812 1408 ntBASIC17.03■□□□□ 0.32
CERKLQ49MI3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CERKLQ49MI3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.02■□□□□ 0.32
CERKLQ49MI3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CERKLQ49MI3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms