Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC18.91■□□□□ 0.62
COL16A1Q07092 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL16A1Q07092 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 AC069421.1-201ENST00000447462 323 ntBASIC18.91■□□□□ 0.62
COL16A1Q07092 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.91■□□□□ 0.62
COL16A1Q07092 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
COL16A1Q07092 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.91■□□□□ 0.62
COL16A1Q07092 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL16A1Q07092 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.91■□□□□ 0.62
COL16A1Q07092 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
COL16A1Q07092 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.9■□□□□ 0.62
COL16A1Q07092 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.9■□□□□ 0.62
COL16A1Q07092 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 IQCF4-203ENST00000428561 420 ntBASIC18.9■□□□□ 0.62
COL16A1Q07092 DUX4L31-201ENST00000446466 1136 ntBASIC18.9■□□□□ 0.62
COL16A1Q07092 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.9■□□□□ 0.62
COL16A1Q07092 AC113398.1-201ENST00000464124 406 ntBASIC18.9■□□□□ 0.62
COL16A1Q07092 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC18.9■□□□□ 0.62
COL16A1Q07092 ABCC6P2-201ENST00000526069 590 ntBASIC18.9■□□□□ 0.62
COL16A1Q07092 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC18.9■□□□□ 0.62
COL16A1Q07092 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL16A1Q07092 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
COL16A1Q07092 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.9■□□□□ 0.62
COL16A1Q07092 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.9■□□□□ 0.62
COL16A1Q07092 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL16A1Q07092 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.9■□□□□ 0.62
COL16A1Q07092 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
COL16A1Q07092 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
COL16A1Q07092 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC18.89■□□□□ 0.62
COL16A1Q07092 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC18.89■□□□□ 0.62
COL16A1Q07092 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.89■□□□□ 0.62
COL16A1Q07092 AC015818.1-201ENST00000451011 244 ntBASIC18.89■□□□□ 0.62
COL16A1Q07092 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC18.89■□□□□ 0.62
COL16A1Q07092 PCTP-206ENST00000573500 919 ntTSL 3 BASIC18.89■□□□□ 0.62
COL16A1Q07092 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.89■□□□□ 0.61
COL16A1Q07092 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 PPP1R2P10-201ENST00000393023 595 ntBASIC18.89■□□□□ 0.61
COL16A1Q07092 AF186996.6-201ENST00000485294 149 ntBASIC18.89■□□□□ 0.61
COL16A1Q07092 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.89■□□□□ 0.61
COL16A1Q07092 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 AC103724.2-201ENST00000520355 476 ntBASIC18.89■□□□□ 0.61
COL16A1Q07092 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.89■□□□□ 0.61
COL16A1Q07092 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC18.89■□□□□ 0.61
COL16A1Q07092 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COL16A1Q07092 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC18.89■□□□□ 0.61
COL16A1Q07092 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
COL16A1Q07092 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC18.89■□□□□ 0.61
COL16A1Q07092 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL16A1Q07092 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 PES1P2-201ENST00000449745 1735 ntBASIC18.88■□□□□ 0.61
COL16A1Q07092 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.88■□□□□ 0.61
COL16A1Q07092 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL16A1Q07092 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL16A1Q07092 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms