Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRPXP78539 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRPXP78539 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SRPXP78539 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SRPXP78539 AC114271.1-201ENST00000612689 2813 ntBASIC12.14□□□□□ -0.47
SRPXP78539 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRPXP78539 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.14□□□□□ -0.47
SRPXP78539 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.14□□□□□ -0.47
SRPXP78539 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SRPXP78539 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SRPXP78539 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SRPXP78539 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.13□□□□□ -0.47
SRPXP78539 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.13□□□□□ -0.47
SRPXP78539 AC036164.1-201ENST00000570544 333 ntBASIC12.13□□□□□ -0.47
SRPXP78539 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.13□□□□□ -0.47
SRPXP78539 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 AC003102.2-201ENST00000589195 1469 ntBASIC12.13□□□□□ -0.47
SRPXP78539 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SRPXP78539 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SRPXP78539 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SRPXP78539 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.13□□□□□ -0.47
SRPXP78539 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.12□□□□□ -0.47
SRPXP78539 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SRPXP78539 AC068760.1-201ENST00000493579 1953 ntBASIC12.12□□□□□ -0.47
SRPXP78539 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SRPXP78539 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms