Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNRPFP62306 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SNRPFP62306 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SNRPFP62306 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.85■□□□□ 0.13
SNRPFP62306 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SNRPFP62306 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 AC004899.1-201ENST00000424687 1714 ntBASIC15.85■□□□□ 0.13
SNRPFP62306 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNRPFP62306 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 AC015656.1-201ENST00000624209 3578 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 KRT18P36-201ENST00000411618 1276 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 PFN1P12-201ENST00000455938 534 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 SCARNA21-201ENST00000517026 139 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 PGAM1P5-201ENST00000548011 764 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.84■□□□□ 0.13
SNRPFP62306 AC091271.1-201ENST00000611877 1162 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 AC068587.8-201ENST00000641239 219 ntBASIC15.84■□□□□ 0.13
SNRPFP62306 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.84■□□□□ 0.13
SNRPFP62306 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNRPFP62306 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNRPFP62306 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNRPFP62306 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SNRPFP62306 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.83■□□□□ 0.13
SNRPFP62306 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
SNRPFP62306 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPFP62306 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPFP62306 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SNRPFP62306 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.83■□□□□ 0.13
SNRPFP62306 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPFP62306 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNRPFP62306 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNRPFP62306 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SNRPFP62306 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRPFP62306 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPFP62306 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPFP62306 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.83■□□□□ 0.12
SNRPFP62306 DPM3-202ENST00000368399 517 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 RNMTL1P1-201ENST00000454103 560 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 KRT18P15-201ENST00000458108 1291 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.83■□□□□ 0.12
SNRPFP62306 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.83■□□□□ 0.12
SNRPFP62306 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.83■□□□□ 0.12
SNRPFP62306 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.83■□□□□ 0.12
SNRPFP62306 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.83■□□□□ 0.12
SNRPFP62306 AC008805.1-201ENST00000590892 364 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
SNRPFP62306 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.83■□□□□ 0.12
SNRPFP62306 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.83■□□□□ 0.12
SNRPFP62306 AL033527.4-201ENST00000641026 673 ntBASIC15.83■□□□□ 0.12
SNRPFP62306 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNRPFP62306 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms