Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SUMO3P55854 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
SUMO3P55854 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.24□□□□□ -0.29
SUMO3P55854 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.24□□□□□ -0.29
SUMO3P55854 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 ST13P19-201ENST00000442505 1124 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SUMO3P55854 KLF2P1-201ENST00000447438 1042 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.24□□□□□ -0.29
SUMO3P55854 AC006122.1-201ENST00000493323 440 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.24□□□□□ -0.29
SUMO3P55854 FAM8A2P-201ENST00000528813 1142 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.24□□□□□ -0.29
SUMO3P55854 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.24□□□□□ -0.29
SUMO3P55854 AC021016.3-201ENST00000608367 477 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 AC007663.3-201ENST00000609632 465 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 AL008721.1-201ENST00000609964 604 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.24□□□□□ -0.29
SUMO3P55854 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 AL513477.1-201ENST00000602865 2407 ntBASIC13.24□□□□□ -0.29
SUMO3P55854 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.24□□□□□ -0.29
SUMO3P55854 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SUMO3P55854 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SUMO3P55854 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SUMO3P55854 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.24□□□□□ -0.29
SUMO3P55854 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SUMO3P55854 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SUMO3P55854 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AC015656.1-201ENST00000624209 3578 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 AHCYP4-201ENST00000419201 1315 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.23□□□□□ -0.29
SUMO3P55854 PFN1P12-201ENST00000455938 534 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.23□□□□□ -0.29
SUMO3P55854 AC106794.1-201ENST00000506935 792 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.23□□□□□ -0.29
SUMO3P55854 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 AL160314.3-201ENST00000556041 767 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.23□□□□□ -0.29
SUMO3P55854 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.23□□□□□ -0.29
SUMO3P55854 AC104982.3-201ENST00000581995 514 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 AC005962.1-201ENST00000584100 773 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 BNIP3P13-201ENST00000599968 566 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.23□□□□□ -0.29
SUMO3P55854 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.23□□□□□ -0.29
SUMO3P55854 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SUMO3P55854 AC144522.1-201ENST00000625111 1658 ntBASIC13.23□□□□□ -0.29
SUMO3P55854 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms