Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH6P55285 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 AC006001.1-201ENST00000325130 474 ntBASIC15.29■□□□□ 0.04
CDH6P55285 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH6P55285 BOLA2P3-201ENST00000404566 256 ntBASIC15.29■□□□□ 0.04
CDH6P55285 MIR1202-201ENST00000408529 83 ntBASIC15.29■□□□□ 0.04
CDH6P55285 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 ARSEP1-201ENST00000420443 635 ntBASIC15.29■□□□□ 0.04
CDH6P55285 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH6P55285 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH6P55285 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 CROCCP4-201ENST00000457096 498 ntBASIC15.29■□□□□ 0.04
CDH6P55285 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 AL162274.1-201ENST00000617191 1098 ntBASIC15.29■□□□□ 0.04
CDH6P55285 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH6P55285 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH6P55285 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH6P55285 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 AC016397.2-201ENST00000624848 1985 ntBASIC15.28■□□□□ 0.04
CDH6P55285 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH6P55285 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH6P55285 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH6P55285 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH6P55285 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CDH6P55285 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH6P55285 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH6P55285 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH6P55285 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH6P55285 KRT8P4-201ENST00000509735 1454 ntBASIC15.27■□□□□ 0.04
CDH6P55285 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH6P55285 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH6P55285 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 AL136309.1-201ENST00000403917 691 ntBASIC15.27■□□□□ 0.04
CDH6P55285 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH6P55285 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH6P55285 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH6P55285 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH6P55285 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms