Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 AC079781.5-202ENST00000641784 3743 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 AC008132.1-202ENST00000342005 1389 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ASCL1P50553 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 AL161670.2-201ENST00000557650 1227 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 FGFR3P5-201ENST00000564496 886 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 AC008825.2-201ENST00000603374 718 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.11□□□□□ -0.31
ASCL1P50553 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ASCL1P50553 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 AC005840.4-201ENST00000541242 2494 ntBASIC13.11□□□□□ -0.31
ASCL1P50553 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.11□□□□□ -0.31
ASCL1P50553 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ASCL1P50553 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.1□□□□□ -0.31
ASCL1P50553 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.1□□□□□ -0.31
ASCL1P50553 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ASCL1P50553 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ASCL1P50553 AC007191.1-201ENST00000623179 2995 ntBASIC13.1□□□□□ -0.31
ASCL1P50553 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 AC090616.6-203ENST00000579186 1945 ntBASIC13.1□□□□□ -0.31
ASCL1P50553 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.1□□□□□ -0.31
ASCL1P50553 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
ASCL1P50553 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
ASCL1P50553 HINT2P1-201ENST00000419438 481 ntBASIC13.1□□□□□ -0.31
ASCL1P50553 AC007274.2-201ENST00000421675 662 ntBASIC13.1□□□□□ -0.31
ASCL1P50553 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.1□□□□□ -0.31
ASCL1P50553 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.1□□□□□ -0.31
ASCL1P50553 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.1□□□□□ -0.31
ASCL1P50553 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.1□□□□□ -0.31
ASCL1P50553 AC104073.2-201ENST00000453737 312 ntBASIC13.1□□□□□ -0.31
ASCL1P50553 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.1□□□□□ -0.31
ASCL1P50553 AC125604.1-201ENST00000496255 707 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms