Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
FDFT1P37268 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FDFT1P37268 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.98□□□□□ -0.01
FDFT1P37268 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 MBLAC2-202ENST00000514906 1936 ntBASIC14.98□□□□□ -0.01
FDFT1P37268 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 HSPA8P5-201ENST00000456928 2069 ntBASIC14.98□□□□□ -0.01
FDFT1P37268 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 AC092933.1-201ENST00000393644 945 ntBASIC14.98□□□□□ -0.01
FDFT1P37268 CD8B2-202ENST00000417670 633 ntBASIC14.98□□□□□ -0.01
FDFT1P37268 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.98□□□□□ -0.01
FDFT1P37268 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.98□□□□□ -0.01
FDFT1P37268 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 AC027237.1-201ENST00000560942 655 ntBASIC14.98□□□□□ -0.01
FDFT1P37268 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
FDFT1P37268 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.98□□□□□ -0.01
FDFT1P37268 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.98□□□□□ -0.01
FDFT1P37268 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FDFT1P37268 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FDFT1P37268 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
FDFT1P37268 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FDFT1P37268 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
FDFT1P37268 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.97□□□□□ -0.01
FDFT1P37268 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FDFT1P37268 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.97□□□□□ -0.01
FDFT1P37268 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms