Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.34■□□□□ 0.69
USP6P35125 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 FGD5P1-202ENST00000614866 2498 ntBASIC19.34■□□□□ 0.69
USP6P35125 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 PDXDC2P-206ENST00000534700 1315 ntBASIC19.34■□□□□ 0.69
USP6P35125 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6P35125 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6P35125 AL512310.5-201ENST00000551999 515 ntBASIC19.34■□□□□ 0.69
USP6P35125 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.34■□□□□ 0.69
USP6P35125 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
USP6P35125 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6P35125 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
USP6P35125 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6P35125 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6P35125 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.33■□□□□ 0.69
USP6P35125 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6P35125 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6P35125 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.33■□□□□ 0.68
USP6P35125 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.33■□□□□ 0.68
USP6P35125 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USP6P35125 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP6P35125 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP6P35125 AC103592.1-201ENST00000394513 664 ntBASIC19.33■□□□□ 0.68
USP6P35125 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.33■□□□□ 0.68
USP6P35125 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6P35125 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6P35125 IDS-203ENST00000428056 1213 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6P35125 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC19.33■□□□□ 0.68
USP6P35125 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6P35125 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USP6P35125 AC013553.1-201ENST00000560906 267 ntBASIC19.33■□□□□ 0.68
USP6P35125 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.33■□□□□ 0.68
USP6P35125 TRMT112P3-201ENST00000580149 358 ntBASIC19.33■□□□□ 0.68
USP6P35125 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
USP6P35125 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.33■□□□□ 0.68
USP6P35125 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.32■□□□□ 0.68
USP6P35125 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC19.32■□□□□ 0.68
USP6P35125 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 WARS-203ENST00000358655 2466 ntTSL 2 BASIC19.32■□□□□ 0.68
USP6P35125 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.32■□□□□ 0.68
USP6P35125 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.32■□□□□ 0.68
USP6P35125 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.32■□□□□ 0.68
USP6P35125 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.32■□□□□ 0.68
USP6P35125 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP6P35125 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6P35125 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
USP6P35125 FUCA1P1-201ENST00000374476 1351 ntBASIC19.31■□□□□ 0.68
USP6P35125 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6P35125 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 RN7SL832P-201ENST00000607781 1756 ntBASIC19.31■□□□□ 0.68
USP6P35125 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
USP6P35125 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
USP6P35125 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6P35125 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 USB1-205ENST00000561743 1135 ntTSL 3 BASIC19.31■□□□□ 0.68
USP6P35125 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.31■□□□□ 0.68
USP6P35125 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.31■□□□□ 0.68
USP6P35125 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6P35125 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6P35125 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6P35125 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6P35125 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms