Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A1P22736 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A1P22736 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NR4A1P22736 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.75□□□□□ -0.21
NR4A1P22736 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.75□□□□□ -0.21
NR4A1P22736 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.75□□□□□ -0.21
NR4A1P22736 RN7SL204P-201ENST00000582831 262 ntBASIC13.75□□□□□ -0.21
NR4A1P22736 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.75□□□□□ -0.21
NR4A1P22736 AC008738.7-201ENST00000609744 511 ntBASIC13.75□□□□□ -0.21
NR4A1P22736 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.75□□□□□ -0.21
NR4A1P22736 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.75□□□□□ -0.21
NR4A1P22736 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
NR4A1P22736 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NR4A1P22736 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
NR4A1P22736 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
NR4A1P22736 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.75□□□□□ -0.21
NR4A1P22736 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.75□□□□□ -0.21
NR4A1P22736 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
NR4A1P22736 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
NR4A1P22736 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NR4A1P22736 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.74□□□□□ -0.21
NR4A1P22736 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NR4A1P22736 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 AC023794.5-201ENST00000564380 2157 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 AC002472.2-201ENST00000442739 958 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.74□□□□□ -0.21
NR4A1P22736 AC135586.1-201ENST00000539323 574 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NR4A1P22736 LINC02560-201ENST00000596379 459 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.74□□□□□ -0.21
NR4A1P22736 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.74□□□□□ -0.21
NR4A1P22736 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.74□□□□□ -0.21
NR4A1P22736 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.74□□□□□ -0.21
NR4A1P22736 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 AC111170.3-201ENST00000624282 2464 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 AC068760.1-201ENST00000493579 1953 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
NR4A1P22736 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 REXO1L4P-201ENST00000605109 1937 ntBASIC13.74□□□□□ -0.21
NR4A1P22736 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NR4A1P22736 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NR4A1P22736 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NR4A1P22736 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.73□□□□□ -0.21
NR4A1P22736 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.73□□□□□ -0.21
NR4A1P22736 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NR4A1P22736 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.73□□□□□ -0.21
NR4A1P22736 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NR4A1P22736 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NR4A1P22736 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.73□□□□□ -0.21
NR4A1P22736 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NR4A1P22736 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.73□□□□□ -0.21
NR4A1P22736 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.73□□□□□ -0.21
NR4A1P22736 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.73□□□□□ -0.21
NR4A1P22736 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.73□□□□□ -0.21
NR4A1P22736 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms