Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ATF3P18847 OR10N1P-201ENST00000392758 869 ntBASIC19.72■□□□□ 0.75
ATF3P18847 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19.72■□□□□ 0.75
ATF3P18847 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 AC025186.1-201ENST00000478174 870 ntBASIC19.72■□□□□ 0.75
ATF3P18847 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 MIR4254-201ENST00000581063 76 ntBASIC19.72■□□□□ 0.75
ATF3P18847 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.72■□□□□ 0.75
ATF3P18847 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ATF3P18847 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.72■□□□□ 0.75
ATF3P18847 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATF3P18847 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ATF3P18847 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.72■□□□□ 0.75
ATF3P18847 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATF3P18847 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATF3P18847 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATF3P18847 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ATF3P18847 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC19.71■□□□□ 0.75
ATF3P18847 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.71■□□□□ 0.75
ATF3P18847 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC19.71■□□□□ 0.75
ATF3P18847 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC19.71■□□□□ 0.75
ATF3P18847 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.71■□□□□ 0.75
ATF3P18847 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC19.71■□□□□ 0.75
ATF3P18847 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.71■□□□□ 0.75
ATF3P18847 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.71■□□□□ 0.75
ATF3P18847 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.71■□□□□ 0.75
ATF3P18847 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.71■□□□□ 0.75
ATF3P18847 AC073869.4-201ENST00000620841 800 ntBASIC19.71■□□□□ 0.75
ATF3P18847 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC19.71■□□□□ 0.75
ATF3P18847 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATF3P18847 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ATF3P18847 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATF3P18847 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATF3P18847 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ATF3P18847 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.7■□□□□ 0.74
ATF3P18847 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATF3P18847 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC19.7■□□□□ 0.74
ATF3P18847 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 IFNWP2-201ENST00000431203 580 ntBASIC19.7■□□□□ 0.74
ATF3P18847 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.7■□□□□ 0.74
ATF3P18847 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATF3P18847 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC19.7■□□□□ 0.74
ATF3P18847 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.7■□□□□ 0.74
ATF3P18847 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC19.7■□□□□ 0.74
ATF3P18847 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ATF3P18847 GGNBP1-204ENST00000613113 887 ntBASIC19.7■□□□□ 0.74
ATF3P18847 CR392039.1-201ENST00000623217 204 ntBASIC19.7■□□□□ 0.74
ATF3P18847 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19.7■□□□□ 0.74
ATF3P18847 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATF3P18847 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ATF3P18847 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ATF3P18847 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 AC008536.3-201ENST00000623282 1599 ntBASIC19.7■□□□□ 0.74
ATF3P18847 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ATF3P18847 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms