Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.13■□□□□ 0.17
GAP43P17677 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.13■□□□□ 0.17
GAP43P17677 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.13■□□□□ 0.17
GAP43P17677 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.13■□□□□ 0.17
GAP43P17677 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.13■□□□□ 0.17
GAP43P17677 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.13■□□□□ 0.17
GAP43P17677 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
GAP43P17677 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.13■□□□□ 0.17
GAP43P17677 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GAP43P17677 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GAP43P17677 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GAP43P17677 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
GAP43P17677 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 GOLGA2P4-201ENST00000441462 777 ntBASIC16.12■□□□□ 0.17
GAP43P17677 TUBB8P8-201ENST00000458717 1058 ntBASIC16.12■□□□□ 0.17
GAP43P17677 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.12■□□□□ 0.17
GAP43P17677 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.12■□□□□ 0.17
GAP43P17677 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.12■□□□□ 0.17
GAP43P17677 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
GAP43P17677 TCAM1P-207ENST00000485295 1537 ntBASIC16.12■□□□□ 0.17
GAP43P17677 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
GAP43P17677 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.12■□□□□ 0.17
GAP43P17677 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GAP43P17677 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms