Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
RETP07949 FAM90A7P-201ENST00000382628 1395 ntBASIC14.79□□□□□ -0.04
RETP07949 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 FAM90A23P-201ENST00000400136 1395 ntBASIC14.79□□□□□ -0.04
RETP07949 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.79□□□□□ -0.04
RETP07949 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 AC078875.1-201ENST00000431907 724 ntBASIC14.79□□□□□ -0.04
RETP07949 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.79□□□□□ -0.04
RETP07949 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.79□□□□□ -0.04
RETP07949 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.79□□□□□ -0.04
RETP07949 CHCHD2P9-201ENST00000461726 456 ntBASIC14.79□□□□□ -0.04
RETP07949 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.79□□□□□ -0.04
RETP07949 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.79□□□□□ -0.04
RETP07949 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.79□□□□□ -0.04
RETP07949 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.79□□□□□ -0.04
RETP07949 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RETP07949 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RETP07949 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RETP07949 MIR3677-201ENST00000578964 60 ntBASIC14.79□□□□□ -0.04
RETP07949 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.79□□□□□ -0.04
RETP07949 AC009884.2-201ENST00000603110 324 ntBASIC14.79□□□□□ -0.04
RETP07949 AC008825.2-201ENST00000603374 718 ntBASIC14.79□□□□□ -0.04
RETP07949 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 AP001527.2-201ENST00000614441 631 ntBASIC14.79□□□□□ -0.04
RETP07949 MIR6769A-201ENST00000617340 73 ntBASIC14.79□□□□□ -0.04
RETP07949 AC148477.9-201ENST00000623974 539 ntBASIC14.79□□□□□ -0.04
RETP07949 AL161773.1-201ENST00000624845 863 ntBASIC14.79□□□□□ -0.04
RETP07949 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.79□□□□□ -0.04
RETP07949 AC092299.1-201ENST00000632679 757 ntBASIC14.79□□□□□ -0.04
RETP07949 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RETP07949 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RETP07949 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RETP07949 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RETP07949 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 AC005912.2-201ENST00000619492 2400 ntBASIC14.78□□□□□ -0.04
RETP07949 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RETP07949 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.78□□□□□ -0.04
RETP07949 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.78□□□□□ -0.04
RETP07949 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.78□□□□□ -0.04
RETP07949 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.78□□□□□ -0.04
RETP07949 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 SCARNA21-201ENST00000517026 139 ntBASIC14.78□□□□□ -0.04
RETP07949 RPL17P45-201ENST00000586289 509 ntBASIC14.78□□□□□ -0.04
RETP07949 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RETP07949 AC087392.5-201ENST00000612517 489 ntBASIC14.78□□□□□ -0.04
RETP07949 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.78□□□□□ -0.04
RETP07949 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RETP07949 AL359258.3-201ENST00000622910 2331 ntBASIC14.78□□□□□ -0.04
RETP07949 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
RETP07949 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.78□□□□□ -0.04
RETP07949 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RETP07949 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.78□□□□□ -0.04
RETP07949 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.78□□□□□ -0.04
RETP07949 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RETP07949 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.78□□□□□ -0.04
RETP07949 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RETP07949 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.77□□□□□ -0.04
RETP07949 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.77□□□□□ -0.04
RETP07949 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RETP07949 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms